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dc.contributor.advisorAdamowicz, Ludwiken_US
dc.contributor.authorMcCarthy, William James, 1964-
dc.creatorMcCarthy, William James, 1964-en_US
dc.date.accessioned2013-05-09T11:36:43Z
dc.date.available2013-05-09T11:36:43Z
dc.date.issued1996en_US
dc.identifier.urihttp://hdl.handle.net/10150/290692
dc.description.abstractThe ab initio treatments of molecular vibrational motion often invoke only the harmonic oscillator approximation. For vibrational modes whose amplitudes access anharmonic regions of the potential energy surface, the harmonic oscillator approximation fails. Low-frequency large-amplitude vibrations, in particular, can access anharmonic regions in addition to other minima of the potential energy surface. Ab initio harmonic frequencies are often scaled to lower values by empirical factors which presumably account for anharmonicity effects as well as an incomplete basis set and account of electron correlation. However, the scaling of those ab initio harmonic frequencies corresponding to low-frequency large-amplitude vibrations results in theoretical values that are still typically several times larger than the experimental values. It is demonstrated in this dissertation that transforming the nuclear motion Hamiltonian to internal coordinates facilitates construction of ab initio potential energy curves, or surfaces, pertaining to low-frequency large-amplitude molecular vibrational modes. The use of internal coordinates complicates the expression of the kinetic energy in the Hamiltonian, and makes it difficult to obtain. Six different methods for determining the kinetic energy expression in internal coordinates are presented and reviewed. The computational implementation of these six methods was performed to allow their critique. Several example calculations of the presented methodology are given. The solution for the vibrational expectation values of the modes expressed by the developed Hamiltonian was also computationally implemented. The resultant theoretical transition frequencies of the molecular systems of 2-sulpholene and 2-aminopyrimidine are combined with experimental studies, and demonstrate the practical usefulness of the presented methodology.
dc.language.isoen_USen_US
dc.publisherThe University of Arizona.en_US
dc.rightsCopyright © is held by the author. Digital access to this material is made possible by the University Libraries, University of Arizona. Further transmission, reproduction or presentation (such as public display or performance) of protected items is prohibited except with permission of the author.en_US
dc.subjectChemistry, Physical.en_US
dc.subjectBiophysics, General.en_US
dc.titleAn ab initio study of low-frequency, large-amplitude molecular vibrationsen_US
dc.typetexten_US
dc.typeDissertation-Reproduction (electronic)en_US
thesis.degree.grantorUniversity of Arizonaen_US
thesis.degree.leveldoctoralen_US
dc.identifier.proquest9720668en_US
thesis.degree.disciplineGraduate Collegeen_US
thesis.degree.disciplineChemistryen_US
thesis.degree.namePh.D.en_US
dc.description.noteThis item was digitized from a paper original and/or a microfilm copy. If you need higher-resolution images for any content in this item, please contact us at repository@u.library.arizona.edu.
dc.identifier.bibrecord.b3458027xen_US
dc.description.admin-noteOriginal file replaced with corrected file October 2023.
refterms.dateFOA2018-07-17T20:06:55Z
html.description.abstractThe ab initio treatments of molecular vibrational motion often invoke only the harmonic oscillator approximation. For vibrational modes whose amplitudes access anharmonic regions of the potential energy surface, the harmonic oscillator approximation fails. Low-frequency large-amplitude vibrations, in particular, can access anharmonic regions in addition to other minima of the potential energy surface. Ab initio harmonic frequencies are often scaled to lower values by empirical factors which presumably account for anharmonicity effects as well as an incomplete basis set and account of electron correlation. However, the scaling of those ab initio harmonic frequencies corresponding to low-frequency large-amplitude vibrations results in theoretical values that are still typically several times larger than the experimental values. It is demonstrated in this dissertation that transforming the nuclear motion Hamiltonian to internal coordinates facilitates construction of ab initio potential energy curves, or surfaces, pertaining to low-frequency large-amplitude molecular vibrational modes. The use of internal coordinates complicates the expression of the kinetic energy in the Hamiltonian, and makes it difficult to obtain. Six different methods for determining the kinetic energy expression in internal coordinates are presented and reviewed. The computational implementation of these six methods was performed to allow their critique. Several example calculations of the presented methodology are given. The solution for the vibrational expectation values of the modes expressed by the developed Hamiltonian was also computationally implemented. The resultant theoretical transition frequencies of the molecular systems of 2-sulpholene and 2-aminopyrimidine are combined with experimental studies, and demonstrate the practical usefulness of the presented methodology.


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