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dc.contributor.authorChen, Wenbo
dc.contributor.authorHasegawa, Daniel K.
dc.contributor.authorKaur, Navneet
dc.contributor.authorKliot, Adi
dc.contributor.authorPinheiro, Patricia Valle
dc.contributor.authorLuan, Junbo
dc.contributor.authorStensmyr, Marcus C.
dc.contributor.authorZheng, Yi
dc.contributor.authorLiu, Wenli
dc.contributor.authorSun, Honghe
dc.contributor.authorXu, Yimin
dc.contributor.authorLuo, Yuan
dc.contributor.authorKruse, Angela
dc.contributor.authorYang, Xiaowei
dc.contributor.authorKontsedalov, Svetlana
dc.contributor.authorLebedev, Galina
dc.contributor.authorFisher, Tonja W.
dc.contributor.authorNelson, David R.
dc.contributor.authorHunter, Wayne B.
dc.contributor.authorBrown, Judith K.
dc.contributor.authorJander, Georg
dc.contributor.authorCilia, Michelle
dc.contributor.authorDouglas, Angela E.
dc.contributor.authorGhanim, Murad
dc.contributor.authorSimmons, Alvin M.
dc.contributor.authorWintermantel, William M.
dc.contributor.authorLing, Kai-Shu
dc.contributor.authorFei, Zhangjun
dc.date.accessioned2017-02-17T17:06:04Z
dc.date.available2017-02-17T17:06:04Z
dc.date.issued2016-12-14
dc.identifier.citationThe draft genome of whitefly Bemisia tabaci MEAM1, a global crop pest, provides novel insights into virus transmission, host adaptation, and insecticide resistance 2016, 14 (1) BMC Biologyen
dc.identifier.issn1741-7007
dc.identifier.doi10.1186/s12915-016-0321-y
dc.identifier.urihttp://hdl.handle.net/10150/622601
dc.description.abstractBackground: The whitefly Bemisia tabaci (Hemiptera: Aleyrodidae) is among the 100 worst invasive species in the world. As one of the most important crop pests and virus vectors, B. tabaci causes substantial crop losses and poses a serious threat to global food security. Results: We report the 615-Mb high-quality genome sequence of B. tabaci Middle East-Asia Minor 1 (MEAM1), the first genome sequence in the Aleyrodidae family, which contains 15,664 protein-coding genes. The B. tabaci genome is highly divergent from other sequenced hemipteran genomes, sharing no detectable synteny. A number of known detoxification gene families, including cytochrome P450s and UDP-glucuronosyltransferases, are significantly expanded in B. tabaci. Other expanded gene families, including cathepsins, large clusters of tandemly duplicated B. tabaci-specific genes, and phosphatidylethanolamine-binding proteins (PEBPs), were found to be associated with virus acquisition and transmission and/or insecticide resistance, likely contributing to the global invasiveness and efficient virus transmission capacity of B. tabaci. The presence of 142 horizontally transferred genes from bacteria or fungi in the B. tabaci genome, including genes encoding hopanoid/sterol synthesis and xenobiotic detoxification enzymes that are not present in other insects, offers novel insights into the unique biological adaptations of this insect such as polyphagy and insecticide resistance. Interestingly, two adjacent bacterial pantothenate biosynthesis genes, panB and panC, have been co-transferred into B. tabaci and fused into a single gene that has acquired introns during its evolution. Conclusions: The B. tabaci genome contains numerous genetic novelties, including expansions in gene families associated with insecticide resistance, detoxification and virus transmission, as well as numerous horizontally transferred genes from bacteria and fungi. We believe these novelties likely have shaped B. tabaci as a highly invasive polyphagous crop pest and efficient vector of plant viruses. The genome serves as a reference for resolving the B. tabaci cryptic species complex, understanding fundamental biological novelties, and providing valuable genetic information to assist the development of novel strategies for controlling whiteflies and the viruses they transmit.
dc.description.sponsorshipAtkinson Center for a Sustainable Future (Cornell University); USDA ARS Area-wide project as a part of the i5k initiative; USDA-ARS Office of International Research Program from USAID Feed-the-Future program [58-0210-3-012]; NSF [IOS-1110080, IOS-1109989, IOS-1354309]; USDA NIFA [2016-67013-24756]; Swedish Research Council U-forsk grant; Israel Science Foundation [1127/13]en
dc.language.isoenen
dc.publisherBIOMED CENTRAL LTDen
dc.relation.urlhttp://bmcbiol.biomedcentral.com/articles/10.1186/s12915-016-0321-yen
dc.rights© Chen et al. 2016 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0.en
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.subjectWhiteflyen
dc.subjectBemisia tabacien
dc.subjectDraft genomeen
dc.subjectVirus transmissionen
dc.subjectPolyphagyen
dc.subjectInsecticide resistanceen
dc.titleThe draft genome of whitefly Bemisia tabaci MEAM1, a global crop pest, provides novel insights into virus transmission, host adaptation, and insecticide resistanceen
dc.typeArticleen
dc.contributor.departmentUniv Arizona, Dept Plant Scien
dc.identifier.journalBMC Biologyen
dc.description.noteOpen access journal.en
dc.description.collectioninformationThis item from the UA Faculty Publications collection is made available by the University of Arizona with support from the University of Arizona Libraries. If you have questions, please contact us at repository@u.library.arizona.edu.en
dc.eprint.versionFinal published versionen
refterms.dateFOA2018-08-19T14:52:16Z
html.description.abstractBackground: The whitefly Bemisia tabaci (Hemiptera: Aleyrodidae) is among the 100 worst invasive species in the world. As one of the most important crop pests and virus vectors, B. tabaci causes substantial crop losses and poses a serious threat to global food security. Results: We report the 615-Mb high-quality genome sequence of B. tabaci Middle East-Asia Minor 1 (MEAM1), the first genome sequence in the Aleyrodidae family, which contains 15,664 protein-coding genes. The B. tabaci genome is highly divergent from other sequenced hemipteran genomes, sharing no detectable synteny. A number of known detoxification gene families, including cytochrome P450s and UDP-glucuronosyltransferases, are significantly expanded in B. tabaci. Other expanded gene families, including cathepsins, large clusters of tandemly duplicated B. tabaci-specific genes, and phosphatidylethanolamine-binding proteins (PEBPs), were found to be associated with virus acquisition and transmission and/or insecticide resistance, likely contributing to the global invasiveness and efficient virus transmission capacity of B. tabaci. The presence of 142 horizontally transferred genes from bacteria or fungi in the B. tabaci genome, including genes encoding hopanoid/sterol synthesis and xenobiotic detoxification enzymes that are not present in other insects, offers novel insights into the unique biological adaptations of this insect such as polyphagy and insecticide resistance. Interestingly, two adjacent bacterial pantothenate biosynthesis genes, panB and panC, have been co-transferred into B. tabaci and fused into a single gene that has acquired introns during its evolution. Conclusions: The B. tabaci genome contains numerous genetic novelties, including expansions in gene families associated with insecticide resistance, detoxification and virus transmission, as well as numerous horizontally transferred genes from bacteria and fungi. We believe these novelties likely have shaped B. tabaci as a highly invasive polyphagous crop pest and efficient vector of plant viruses. The genome serves as a reference for resolving the B. tabaci cryptic species complex, understanding fundamental biological novelties, and providing valuable genetic information to assist the development of novel strategies for controlling whiteflies and the viruses they transmit.


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© Chen et al. 2016 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0.
Except where otherwise noted, this item's license is described as © Chen et al. 2016 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0.