Automated system for training and assessing reaching and grasping behaviors in rodents
Author
Jordan, G.A.Vishwanath, A.
Holguin, G.
Bartlett, M.J.
Tapia, A.K.
Winter, G.M.
Sexauer, M.R.
Stopera, C.J.
Falk, T.
Cowen, S.L.
Affiliation
Biomedical Engineering, University of ArizonaPsychology, University of Arizona
Neurology, University of Arizona
Neuroscience, University of Arizona
Pharmacology, University of Arizona
Issue Date
2023-11-16Keywords
AutomationGrasping
Hippocampus
Motor control
Motor cortex
Parkinson's disease
Reaching
String pulling
Metadata
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ELSEVIER SCIENCE BVCitation
Jordan, G. A., Vishwanath, A., Holguin, G., Bartlett, M. J., Tapia, A. K., Winter, G. M., ... & Cowen, S. L. (2024). Automated system for training and assessing reaching and grasping behaviors in rodents. Journal of Neuroscience Methods, 401, 109990.Journal
Journal of neuroscience methodsRights
© 2023 The Author(s). Published by Elsevier B.V. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).Collection Information
This item from the UA Faculty Publications collection is made available by the University of Arizona with support from the University of Arizona Libraries. If you have questions, please contact us at repository@u.library.arizona.edu.Abstract
BACKGROUND: Reaching, grasping, and pulling behaviors are studied across species to investigate motor control and problem solving. String pulling is a distinct reaching and grasping behavior that is rapidly learned, requires bimanual coordination, is ethologically grounded, and has been applied across species and disease conditions. NEW METHOD: Here we describe the PANDA system (Pulling And Neural Data Analysis), a hardware and software system that integrates a continuous string loop connected to a rotary encoder, feeder, microcontroller, high-speed camera, and analysis software for the assessment and training of reaching, grasping, and pulling behaviors and synchronization with neural data. RESULTS: We demonstrate this system in rats implanted with electrodes in motor cortex and hippocampus and show how it can be used to assess relationships between reaching, pulling, and grasping movements and single-unit and local-field activity. Furthermore, we found that automating the shaping procedure significantly improved performance over manual training, with rats pulling > 100 m during a 15-minute session. COMPARISON WITH EXISTING METHODS: String-pulling is typically shaped by tying food reward to the string and visually scoring behavior. The system described here automates training, streamlines video assessment with deep learning, and automatically segments reaching movements into distinct reach/pull phases. No system, to our knowledge, exists for the automated shaping and assessment of this behavior. CONCLUSIONS: This system will be of general use to researchers investigating motor control, motivation, sensorimotor integration, and motor disorders such as Parkinson's disease and stroke. Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.Note
Open access articleISSN
1872-678XPubMed ID
37866457Version
Final Published Versionae974a485f413a2113503eed53cd6c53
10.1016/j.jneumeth.2023.109990
Scopus Count
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Except where otherwise noted, this item's license is described as © 2023 The Author(s). Published by Elsevier B.V. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
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