A transformer-based diffusion probabilistic model for heart rate and blood pressure forecasting in Intensive Care Unit
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TDSTF_clean.pdf
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2025-02-08
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Final Accepted Manuscript
Affiliation
Department of Electrical & Computer Engineering, The University of ArizonaAsthma and Airway Disease Research Center, College of Medicine, The University of Arizona
Bio5 Institute, The University of Arizona
College of Nursing, The University of Arizona
Issue Date
2024-02-08
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Elsevier Ireland LtdCitation
Chang, P., Li, H., Quan, S. F., Lu, S., Wung, S. F., Roveda, J., & Li, A. (2024). A Transformer-based Diffusion Probabilistic Model for Heart Rate and Blood Pressure Forecasting in Intensive Care Unit. Computer Methods and Programs in Biomedicine, 108060.Rights
© 2024 Elsevier B.V. All rights reserved.Collection Information
This item from the UA Faculty Publications collection is made available by the University of Arizona with support from the University of Arizona Libraries. If you have questions, please contact us at repository@u.library.arizona.edu.Abstract
Background and Objective: Vital sign monitoring in the Intensive Care Unit (ICU) is crucial for enabling prompt interventions for patients. This underscores the need for an accurate predictive system. Therefore, this study proposes a novel deep learning approach for forecasting Heart Rate (HR), Systolic Blood Pressure (SBP), and Diastolic Blood Pressure (DBP) in the ICU. Methods: We extracted 24,886 ICU stays from the MIMIC-III database which contains data from over 46 thousand patients, to train and test the model. The model proposed in this study, Transformer-based Diffusion Probabilistic Model for Sparse Time Series Forecasting (TDSTF), merges Transformer and diffusion models to forecast vital signs. The TDSTF model showed state-of-the-art performance in predicting vital signs in the ICU, outperforming other models' ability to predict distributions of vital signs and being more computationally efficient. The code is available at https://github.com/PingChang818/TDSTF. Results: The results of the study showed that TDSTF achieved a Standardized Average Continuous Ranked Probability Score (SACRPS) of 0.4438 and a Mean Squared Error (MSE) of 0.4168, an improvement of 18.9% and 34.3% over the best baseline model, respectively. The inference speed of TDSTF is more than 17 times faster than the best baseline model. Conclusion: TDSTF is an effective and efficient solution for forecasting vital signs in the ICU, and it shows a significant improvement compared to other models in the field.Note
12 month embargo; first published 8 February 2024EISSN
1872-7565PubMed ID
38350189Version
Final accepted manuscriptae974a485f413a2113503eed53cd6c53
10.1016/j.cmpb.2024.108060
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