Name:
journal.pcbi.1011270.pdf
Size:
872.3Kb
Format:
PDF
Description:
Final Published Version
Author
Swetnam, T.L.Antin, P.B.
Bartelme, R.
Bucksch, A.
Camhy, D.
Chism, G.
Choi, I.
Cooksey, A.M.
Cosi, M.
Cowen, C.
Culshaw-Maurer, M.
Davey, R.
Davey, S.
Devisetty, U.
Edgin, T.
Edmonds, A.
Fedorov, D.
Frady, J.
Fonner, J.
Gillan, J.K.
Hossain, I.
Joyce, B.
Lang, K.
Lee, T.
Littin, S.
McEwen, I.
Merchant, N.
Micklos, D.
Nelson, A.
Ramsey, A.
Roberts, S.
Sarando, P.
Skidmore, E.
Song, J.
Sprinkle, M.M.
Srinivasan, S.
Stanzione, D.
Strootman, J.D.
Stryeck, S.
Tuteja, R.
Vaughn, M.
Wali, M.
Wall, M.
Walls, R.
Wang, L.
Wickizer, T.
Williams, J.
Wregglesworth, J.
Lyons, E.
Affiliation
The University of ArizonaIssue Date
2024-02-07
Metadata
Show full item recordPublisher
Public Library of ScienceCitation
Swetnam TL, Antin PB, Bartelme R, Bucksch A, Camhy D, Chism G, et al. (2024) CyVerse: Cyberinfrastructure for open science. PLoS Comput Biol 20(2): e1011270. https://doi.org/10.1371/journal.pcbi.1011270Journal
PLoS Computational BiologyRights
© 2024 Swetnam et al. This is an open access article distributed under the terms of the Creative Commons Attribution License.Collection Information
This item from the UA Faculty Publications collection is made available by the University of Arizona with support from the University of Arizona Libraries. If you have questions, please contact us at repository@u.library.arizona.edu.Abstract
CyVerse, the largest publicly-funded open-source research cyberinfrastructure for life sciences, has played a crucial role in advancing data-driven research since the 2010s. As the technology landscape evolved with the emergence of cloud computing platforms, machine learning and artificial intelligence (AI) applications, CyVerse has enabled access by providing interfaces, Software as a Service (SaaS), and cloud-native Infrastructure as Code (IaC) to leverage new technologies. CyVerse services enable researchers to integrate institutional and private computational resources, custom software, perform analyses, and publish data in accordance with open science principles. Over the past 13 years, CyVerse has registered more than 124,000 verified accounts from 160 countries and was used for over 1,600 peer-reviewed publications. Since 2011, 45,000 students and researchers have been trained to use CyVerse. The platform has been replicated and deployed in three countries outside the US, with additional private deployments on commercial clouds for US government agencies and multinational corporations. In this manuscript, we present a strategic blueprint for creating and managing SaaS cyberinfrastructure and IaC as free and opensource software. © 2024 Swetnam et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.Note
Open access journalISSN
1553-734XVersion
Final Published Versionae974a485f413a2113503eed53cd6c53
10.1371/journal.pcbi.1011270
Scopus Count
Collections
Except where otherwise noted, this item's license is described as © 2024 Swetnam et al. This is an open access article distributed under the terms of the Creative Commons Attribution License.

